Index A | C | D | E | G | H | I | M | N | P | Q | R | S | T | U | V | W A add_edge() (epiworldpy.Model method) add_entity() (epiworldpy.Agent method) (epiworldpy.Model method) add_globalevent() (epiworldpy.Model method) add_param() (epiworldpy.Model method) add_state() (epiworldpy.Model method) add_target() (epiworldpy.Tool method) add_tool() (epiworldpy.Agent method) (epiworldpy.Model method) add_user_data() (epiworldpy.DataBase method) add_virus() (epiworldpy.Model method) Agent (class in epiworldpy) agents_bernoulli() (epiworldpy.Model method) agents_empty_graph() (epiworldpy.Model method) agents_from_edgelist() (epiworldpy.Model method) agents_sbm() (epiworldpy.Model method) agents_smallworld() (epiworldpy.Model method) C change_state() (epiworldpy.Agent method) clear_targets() (epiworldpy.Tool method) D DataBase (class in epiworldpy) default() (epiworldpy.NumpyJSONEncoder method) (epiworldpy.UpdateFun static method) default_update_exposed() (epiworldpy.UpdateFun static method) default_update_susceptible() (epiworldpy.UpdateFun static method) DiagramType (class in epiworldpy) distribute() (epiworldpy.Entity method) (epiworldpy.Tool method) (epiworldpy.Virus method) distribute_randomly() (epiworldpy.Entity static method) distribute_to_range() (epiworldpy.Entity static method) distribute_to_set() (epiworldpy.Entity static method) draw_from_data() (epiworldpy.ModelDiagram method) draw_from_file() (epiworldpy.ModelDiagram method) draw_from_files() (epiworldpy.ModelDiagram method) E Entity (class in epiworldpy) extract_database_results() (in module epiworldpy) G get_active_cases() (epiworldpy.DataBase method) get_agent() (epiworldpy.Model method) get_agents() (epiworldpy.Model method) get_agents_ids() (epiworldpy.Entity method) get_agents_in_state() (epiworldpy.Model method) get_agents_states() (epiworldpy.Model method) get_date() (epiworldpy.Tool method) (epiworldpy.Virus method) get_db() (epiworldpy.Model method) get_elapsed() (epiworldpy.Model method) get_entities() (epiworldpy.Agent method) get_entity() (epiworldpy.Model method) get_generation_time() (epiworldpy.DataBase method) get_hist_tool() (epiworldpy.DataBase method) get_hist_total() (epiworldpy.DataBase method) get_hist_transition_matrix() (epiworldpy.DataBase method) get_hist_virus() (epiworldpy.DataBase method) get_hospitalizations() (epiworldpy.DataBase method) get_id() (epiworldpy.Agent method) (epiworldpy.Entity method) (epiworldpy.Tool method) (epiworldpy.Virus method) get_incubation() (epiworldpy.Virus method) get_last_transmission_mode() (epiworldpy.Model method) get_lineage_id() (epiworldpy.Virus method) get_location() (epiworldpy.Entity method) get_n_entities() (epiworldpy.Agent method) (epiworldpy.Model method) get_n_globalevents() (epiworldpy.Model method) get_n_neighbors() (epiworldpy.Agent method) get_n_replicates() (epiworldpy.Model method) get_n_states() (epiworldpy.Model method) get_n_tools() (epiworldpy.Agent method) (epiworldpy.DataBase method) (epiworldpy.Model method) get_n_viruses() (epiworldpy.DataBase method) (epiworldpy.Model method) get_name() (epiworldpy.Entity method) (epiworldpy.Model method) (epiworldpy.Tool method) (epiworldpy.Virus method) get_ndays() (epiworldpy.Model method) get_neighbors() (epiworldpy.Agent method) get_outbreak_size() (epiworldpy.DataBase method) get_param() (epiworldpy.Model method) get_prob_death() (epiworldpy.Virus method) get_prob_infecting() (epiworldpy.Virus method) get_prob_recovery() (epiworldpy.Virus method) get_queue() (epiworldpy.Tool method) (epiworldpy.Virus method) get_reproductive_number() (epiworldpy.DataBase method) get_rewire_prop() (epiworldpy.Model method) get_sim_id() (epiworldpy.Model method) get_state() (epiworldpy.Agent method) (epiworldpy.Tool method) (epiworldpy.Virus method) get_state_last_changed() (epiworldpy.Agent method) get_state_prev() (epiworldpy.Agent method) get_states() (epiworldpy.Model method) get_targets() (epiworldpy.Tool method) get_today_total() (epiworldpy.DataBase method) get_today_transition_matrix() (epiworldpy.DataBase method) get_today_virus() (epiworldpy.DataBase method) get_tools() (epiworldpy.Agent method) get_transition_probability() (epiworldpy.DataBase method) get_transmission_kappa() (epiworldpy.Model method) get_transmission_mode() (epiworldpy.Model method) get_transmissions() (epiworldpy.DataBase method) get_verbose() (epiworldpy.Model method) get_virus() (epiworldpy.Agent method) H has_edge() (epiworldpy.Model method) has_entity() (epiworldpy.Agent method) has_globalevent() (epiworldpy.Model method) has_neighbor() (epiworldpy.Agent method) has_param() (epiworldpy.Model method) has_tool() (epiworldpy.Agent method) has_virus() (epiworldpy.Agent method) I initial_states() (epiworldpy.Model method) is_directed() (epiworldpy.Model method) is_queuing_on() (epiworldpy.Model method) M make_save_run() (epiworldpy.Model static method) Model (class in epiworldpy) ModelDiagram (class in epiworldpy) ModelDiffNet (class in epiworldpy.epimodels) ModelSEIR (class in epiworldpy.epimodels) ModelSEIRCONN (class in epiworldpy.epimodels) ModelSEIRD (class in epiworldpy.epimodels) ModelSEIRDCONN (class in epiworldpy.epimodels) ModelSEIRMixing (class in epiworldpy.epimodels) ModelSEIRMixingQuarantine (class in epiworldpy.epimodels) ModelSEIRNetworkQuarantine (class in epiworldpy.epimodels) ModelSIR (class in epiworldpy.epimodels) ModelSIRCONN (class in epiworldpy.epimodels) ModelSIRD (class in epiworldpy.epimodels) ModelSIRDCONN (class in epiworldpy.epimodels) ModelSIRMixing (class in epiworldpy.epimodels) ModelSIS (class in epiworldpy.epimodels) ModelSISD (class in epiworldpy.epimodels) ModelSURV (class in epiworldpy.epimodels) mutate() (epiworldpy.Virus method) mutate_virus() (epiworldpy.Agent method) N NativeUpdateFun (class in epiworldpy) new_entity_to_agent_fun() (epiworldpy.Entity static method) numpy_json_decoder() (in module epiworldpy) NumpyJSONEncoder (class in epiworldpy) P par() (epiworldpy.Model method) params() (epiworldpy.Model method) post_recovery() (epiworldpy.Virus method) print() (epiworldpy.Entity method) (epiworldpy.Model method) (epiworldpy.Tool method) (epiworldpy.Virus method) print_state_codes() (epiworldpy.Model method) Q queuing_off() (epiworldpy.Model method) queuing_on() (epiworldpy.Model method) R rate() (epiworldpy.UpdateFun static method) record() (epiworldpy.DataBase method) record_tool() (epiworldpy.DataBase method) record_transmission() (epiworldpy.DataBase method) record_virus() (epiworldpy.DataBase method) reset() (epiworldpy.DataBase method) (epiworldpy.Model method) rewire() (epiworldpy.Model method) rm_edge() (epiworldpy.Model method) rm_entity() (epiworldpy.Agent method) rm_globalevent() (epiworldpy.Model method) rm_tool() (epiworldpy.Agent method) rm_virus() (epiworldpy.Agent method) run() (epiworldpy.Model method) run_globalevents() (epiworldpy.Model method) run_multiple() (epiworldpy.Model method) S seed() (epiworldpy.Model method) set_date() (epiworldpy.Tool method) (epiworldpy.Virus method) set_death_reduction() (epiworldpy.Tool method) set_death_reduction_fun() (epiworldpy.Tool method) set_distribution() (epiworldpy.Entity method) (epiworldpy.Tool method) (epiworldpy.Virus method) set_incubation() (epiworldpy.Virus method) set_incubation_fun() (epiworldpy.Virus method) set_location() (epiworldpy.Entity method) set_mutation() (epiworldpy.Virus method) set_name() (epiworldpy.Model method) (epiworldpy.Tool method) (epiworldpy.Virus method) set_param() (epiworldpy.Model method) set_post_immunity() (epiworldpy.Virus method) set_post_recovery() (epiworldpy.Virus method) set_prob_death() (epiworldpy.Virus method) set_prob_death_fun() (epiworldpy.Virus method) set_prob_infecting() (epiworldpy.Virus method) set_prob_infecting_fun() (epiworldpy.Virus method) set_prob_recovery() (epiworldpy.Virus method) set_prob_recovery_fun() (epiworldpy.Virus method) set_queue() (epiworldpy.Entity method) (epiworldpy.Tool method) (epiworldpy.Virus method) set_recovery_enhancer() (epiworldpy.Tool method) set_recovery_enhancer_fun() (epiworldpy.Tool method) set_rewire_prop() (epiworldpy.Model method) set_sequence() (epiworldpy.Virus method) set_state() (epiworldpy.Entity method) (epiworldpy.Tool method) (epiworldpy.Virus method) set_state_function() (epiworldpy.Model method) set_susceptibility_reduction() (epiworldpy.Tool method) set_susceptibility_reduction_fun() (epiworldpy.Tool method) set_targets() (epiworldpy.Tool method) set_transmission_mode() (epiworldpy.Model method) set_transmission_reduction() (epiworldpy.Tool method) set_transmission_reduction_fun() (epiworldpy.Tool method) set_virus() (epiworldpy.Agent method) size() (epiworldpy.DataBase method) (epiworldpy.Entity method) (epiworldpy.Model method) state_of() (epiworldpy.Model method) susceptible() (epiworldpy.UpdateFun static method) T targets() (epiworldpy.Tool method) today() (epiworldpy.Model method) Tool (class in epiworldpy) U UpdateFun (class in epiworldpy) V verbose_off() (epiworldpy.Model method) verbose_on() (epiworldpy.Model method) Virus (class in epiworldpy) W write_data() (epiworldpy.DataBase method) (epiworldpy.Model method) write_db_results_hdf5() (in module epiworldpy) write_db_results_json() (in module epiworldpy) write_db_results_multiple_csv() (in module epiworldpy) write_db_results_multiple_json() (in module epiworldpy) write_db_results_zarr() (in module epiworldpy) write_edgelist() (epiworldpy.Model method)