File List

Here is a list of all files with brief descriptions:

• dir epiworld-src
  • dir include
    • dir epiworld
      • file adjlist-bones.hpp
      • file adjlist-meat.hpp
      • file agent-bones.hpp
      • file agent-events-meat.hpp
      • file agent-meat-state.hpp Sampling functions are getting big, so we keep them in a separate file.
      • file agent-meat-virus-sampling.hpp
      • file agent-meat.hpp
      • file agentssample-bones.hpp
      • file config.hpp
      • file contacttracing-bones.hpp
      • file contacttracing-meat.hpp
      • file database-bones.hpp
      • file database-meat.hpp
      • file entity-bones.hpp
      • file entity-distribute-meat.hpp
      • file entity-meat.hpp
      • file epiassert-bones.hpp
      • file epiworld-macros.hpp
      • dir globalevents
        • file interventionmeaslespep-bones.hpp
        • file interventionmeaslespep-meat.hpp
      • dir math
        • file distributions.hpp
        • dir lfmcmc
          • file lfmcmc-bones.hpp
          • file lfmcmc-meat-print.hpp
          • file lfmcmc-meat.hpp
        • file lfmcmc.hpp
      • dir models
        • file diffnet.hpp
        • file globalevents.hpp
        • file init-functions.hpp
        • file measlesmixing.hpp Template for a Measles model with population mixing, quarantine, and contact tracing.
        • file measlesmixingriskquarantine.hpp Template for a Measles model with population mixing and risk-based quarantine.
        • file measlesschool.hpp
        • file models.hpp
        • file seir.hpp
        • file seirconnected.hpp
        • file seird.hpp
        • file seirdconnected.hpp
        • file seirmixing.hpp
        • file seirmixingquarantine.hpp Template for a Susceptible-Exposed-Infected-Removed (SEIR) model with mixing, quarantine, and contact tracing.
        • file sir.hpp
        • file sirconnected.hpp
        • file sird.hpp
        • file sirdconnected.hpp
        • file sirlogit.hpp
        • file sirmixing.hpp
        • file sis.hpp
        • file sisd.hpp
        • file surveillance.hpp
      • dir tools
        • file immunoglobulin.hpp
        • file vaccine.hpp
      • file epiworld.hpp
      • file globalevent-bones.hpp
      • file globalevent-meat.hpp
      • file hospitalizationstracker-bones.hpp
      • file hospitalizationstracker-meat.hpp
      • file misc.hpp
      • file model-bones.hpp
      • file model-meat-print.hpp
      • file model-meat.hpp
      • file model-rand-meat.hpp
      • file modeldiagram-bones.hpp
      • file modeldiagram-meat.hpp
      • file progress.hpp
      • file queue-bones.hpp
      • file randgraph.hpp
      • file random_graph.hpp
      • file rng-utils.hpp
      • file seq_processing.hpp
      • file tool-bones.hpp
      • file tool-distribute-meat.hpp
      • file tool-meat.hpp
      • file userdata-bones.hpp
      • file userdata-meat.hpp
      • file virus-bones.hpp
      • file virus-distribute-meat.hpp
      • file virus-meat.hpp
      • file viruses-bones.hpp